Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
SDZ90366.1Acyl-CoA reductase (LuxC). (397 aa)    
Predicted Functional Partners:
SDZ90344.1
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II.
 
 0.975
SDZ90387.1
Acyl-protein synthetase, LuxE.
 
 
 0.973
SDZ90436.1
Hypothetical protein.
 
  
 0.964
SEA79973.1
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II.
  
 0.936
SEA25416.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
   
 0.896
SEA51271.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
   
 0.850
SDZ90412.1
Glyoxylase, beta-lactamase superfamily II.
 
   
 0.838
SDZ89356.1
PTS system IIA component, Glc family.
   
 
 0.818
SEA83275.1
PTS system IIA component, Glc family /PTS system IIB component, Glc family /PTS system IIC component, Glc family.
   
 
 0.818
SDZ90317.1
C_GCAxxG_C_C family probable redox protein.
    
 0.794
Your Current Organism:
Eubacterium aggregans
NCBI taxonomy Id: 81409
Other names: DSM 12183, E. aggregans, Eubacterium aggregans Mechichi et al. 2000, strain SR12
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