Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
SEA01486.1Uncharacterized membrane protein. (163 aa)    
Predicted Functional Partners:
SEA01516.1
Hypothetical protein.
       0.783
SEA01544.1
Aminopeptidase P Metallo peptidase. MEROPS family M24B.
       0.700
SEA01462.1
tRNA(Ile)-lysidine synthase TilS/MesJ; Belongs to the TtcA family.
       0.577
SEA01436.1
Two-component system, OmpR family, response regulator VicR.
       0.490
SEA01370.1
Hypothetical protein.
       0.486
SEA01405.1
Two-component system, OmpR family, sensor histidine kinase VicK.
       0.486
SEA57041.1
Phosphomannomutase.
 
     0.427
metK
Methionine adenosyltransferase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.
       0.406
Your Current Organism:
Eubacterium aggregans
NCBI taxonomy Id: 81409
Other names: DSM 12183, E. aggregans, Eubacterium aggregans Mechichi et al. 2000, strain SR12
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