Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
SDZ97692.1Putative ABC transport system ATP-binding protein. (242 aa)    
Predicted Functional Partners:
SDZ97660.1
Putative ABC transport system permease protein.
 0.999
SEA66008.1
Putative ABC transport system permease protein.
 0.994
SEA68066.1
Putative ABC transport system permease protein.
  
 0.986
SEA59028.1
Putative ABC transport system permease protein.
 
 0.982
SDZ97720.1
HlyD family secretion protein.
 
 
 0.931
SEA47734.1
Tungstate transport system ATP-binding protein.
  
  
  0.773
SDZ97631.1
Hypothetical protein.
       0.714
SEA78521.1
ATP-binding cassette, subfamily B.
    
0.642
SDZ88961.1
Putative ABC transport system permease protein.
  
 0.634
SEA51991.1
Amino acid ABC transporter membrane protein, PAAT family.
   
 0.545
Your Current Organism:
Eubacterium aggregans
NCBI taxonomy Id: 81409
Other names: DSM 12183, E. aggregans, Eubacterium aggregans Mechichi et al. 2000, strain SR12
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