Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SDZ98723.1Uncharacterized 2Fe-2 and 4Fe-4S clusters-containing protein, contains DUF4445 domain. (602 aa)    
Predicted Functional Partners:
SDZ99024.1
CO-methylating acetyl-CoA synthase corrinoid iron-sulfur protein large subunit precursor.
 
 
 
 0.852
SDZ98989.1
acetyl-CoA decarbonylase/synthase delta subunit.
 
 
 
 0.851
SDZ98689.1
Imidazolonepropionase.
 
     0.770
gcvH
Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.
     
 0.741
SDZ98751.1
Dihydrofolate synthase / folylpolyglutamate synthase; Belongs to the folylpolyglutamate synthase family.
       0.714
SEA19674.1
Trimethylamine:corrinoid methyltransferase.
 
     0.671
SEA76697.1
Trimethylamine:corrinoid methyltransferase.
 
     0.664
SDZ98564.1
Methylene-tetrahydrofolate reductase C terminal.
 
   
 0.662
SEA20129.1
Trimethylamine:corrinoid methyltransferase.
 
     0.649
SEA20158.1
Trimethylamine---corrinoid protein Co-methyltransferase.
 
     0.640
Your Current Organism:
Eubacterium aggregans
NCBI taxonomy Id: 81409
Other names: DSM 12183, E. aggregans, Eubacterium aggregans Mechichi et al. 2000, strain SR12
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