Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
SDZ98961.1Protein of unknown function. (214 aa)    
Predicted Functional Partners:
SDZ98901.1
CO dehydrogenase maturation factor.
 
     0.948
SDZ98931.1
Uncharacterized 2Fe-2 and 4Fe-4S clusters-containing protein, contains DUF4445 domain.
 
     0.938
SDZ98989.1
acetyl-CoA decarbonylase/synthase delta subunit.
 
     0.899
SDZ99024.1
CO-methylating acetyl-CoA synthase corrinoid iron-sulfur protein large subunit precursor.
 
     0.893
SDZ99156.1
acetyl-CoA decarbonylase/synthase beta subunit.
 
     0.863
SDZ99127.1
CO dehydrogenase maturation factor.
 
     0.826
SDZ99094.1
Ni-dependent carbon monoxide dehydrogenase precursor.
 
     0.816
SDZ99062.1
Methyltetrahydrofolate--corrinoid iron-sulfur protein Co-methyltransferase.
 
     0.804
SDZ99181.1
Hypothetical protein.
 
     0.775
SDZ98564.1
Methylene-tetrahydrofolate reductase C terminal.
  
     0.755
Your Current Organism:
Eubacterium aggregans
NCBI taxonomy Id: 81409
Other names: DSM 12183, E. aggregans, Eubacterium aggregans Mechichi et al. 2000, strain SR12
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