STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEA18696.1Rubrerythrin. (219 aa)    
Predicted Functional Partners:
SEA25416.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
 
 0.935
SEA47856.1
Formate dehydrogenase major subunit.
   
 0.904
SEA47942.1
NADH-quinone oxidoreductase subunit F.
  
 
 0.872
SEA51916.1
Superoxide reductase.
 
  
 0.836
SEA42815.1
Desulfoferrodoxin.
 
  
 0.810
SEA79303.1
Pyridine nucleotide-disulphide oxidoreductase.
  
 0.805
SEA81477.1
BFD-like [2Fe-2S] binding domain-containing protein.
  
 0.805
SEA26463.1
NAD(P)-dependent iron-only hydrogenase diaphorase component iron-sulfur protein.
    
 0.799
SEA47962.1
NADH-quinone oxidoreductase subunit E.
    
 0.794
SEA21101.1
Peroxiredoxin (alkyl hydroperoxide reductase subunit C); Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily.
  
  
 0.786
Your Current Organism:
Eubacterium aggregans
NCBI taxonomy Id: 81409
Other names: DSM 12183, E. aggregans, Eubacterium aggregans Mechichi et al. 2000, strain SR12
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