Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SEA19048.1Propionaldehyde dehydrogenase. (469 aa)    
Predicted Functional Partners:
SEA12876.1
Alcohol dehydrogenase, class IV.
 0.966
SEA46584.1
Alcohol dehydrogenase, class IV.
 0.963
SEA42475.1
Hypothetical protein.
 0.958
SEA18286.1
Lactaldehyde reductase.
 0.950
SEA79973.1
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II.
  
 0.936
SEA25416.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
   
 0.896
SEA19074.1
Microcompartment protein PduB.
 
   
 0.895
SEA65858.1
Alcohol dehydrogenase, class IV.
 0.886
SEA51271.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
   
 0.850
SEA35498.1
Propanediol dehydratase large subunit.
 
  
 0.827
Your Current Organism:
Eubacterium aggregans
NCBI taxonomy Id: 81409
Other names: DSM 12183, E. aggregans, Eubacterium aggregans Mechichi et al. 2000, strain SR12
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