Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SEA20158.1Trimethylamine---corrinoid protein Co-methyltransferase. (471 aa)    
Predicted Functional Partners:
SEA20100.1
Hypothetical protein.
 
     0.824
SEA20129.1
Trimethylamine:corrinoid methyltransferase.
 
  
 
0.809
SEA30166.1
Methanol:corrinoid methyltransferase.
  
  
  0.781
SEA62694.1
2,4-dienoyl-CoA reductase.
     
  0.712
SEA62831.1
2,4-dienoyl-CoA reductase.
     
  0.712
SEA60838.1
Methanogenic corrinoid protein MtbC1.
  
 
  0.670
SEA60892.1
Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family.
  
  
  0.650
SEA20378.1
Uncharacterized 2Fe-2 and 4Fe-4S clusters-containing protein, contains DUF4445 domain.
 
     0.645
SDZ98723.1
Uncharacterized 2Fe-2 and 4Fe-4S clusters-containing protein, contains DUF4445 domain.
 
     0.640
SEA20550.1
Methanogenic corrinoid protein MtbC1.
  
 
  0.640
Your Current Organism:
Eubacterium aggregans
NCBI taxonomy Id: 81409
Other names: DSM 12183, E. aggregans, Eubacterium aggregans Mechichi et al. 2000, strain SR12
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