Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
SEA28466.1Dihydroxyacetone kinase, N-terminal domain. (333 aa)    
Predicted Functional Partners:
SEA64418.1
Dihydroxyacetone kinase DhaL subunit.
 
 0.995
SEA28519.1
Dihydroxyacetone kinase, C-terminal domain.
 
 
 0.981
SEA19389.1
Dihydroxyacetone kinase DhaL subunit.
 
 0.980
SEA19455.1
Dihydroxyacetone kinase, phosphotransfer subunit.
 
 0.962
SEA64398.1
Dihydroxyacetone kinase, phosphotransfer subunit.
 
 0.961
SEA19417.1
Dihydroxyacetone kinase DhaK subunit.
  
  
 
0.774
SEA64442.1
Dihydroxyacetone kinase DhaK subunit.
  
  
 
0.772
SEA81135.1
Glycerol 2-dehydrogenase (NAD+).
  
 
 0.757
SEA28494.1
Hypothetical protein.
 
     0.743
SEA28432.1
Putative autoinducer-2 (AI-2) aldolase.
 
     0.690
Your Current Organism:
Eubacterium aggregans
NCBI taxonomy Id: 81409
Other names: DSM 12183, E. aggregans, Eubacterium aggregans Mechichi et al. 2000, strain SR12
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