Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SEA30040.1Transposase (or an inactivated derivative); Required for the transposition of the insertion element. (396 aa)    
Predicted Functional Partners:
SEA60700.1
Transposase, Mutator family; Required for the transposition of the insertion element.
  
     0.710
SEA79423.1
Transposase, Mutator family; Required for the transposition of the insertion element.
  
     0.693
SEA30017.1
Predicted ATP-dependent endonuclease of the OLD family, contains P-loop ATPase and TOPRIM domains.
       0.498
SEA29993.1
Superfamily I DNA or RNA helicase.
       0.491
Your Current Organism:
Eubacterium aggregans
NCBI taxonomy Id: 81409
Other names: DSM 12183, E. aggregans, Eubacterium aggregans Mechichi et al. 2000, strain SR12
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