Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SEA28519.1Dihydroxyacetone kinase, C-terminal domain. (207 aa)    
Predicted Functional Partners:
SEA19455.1
Dihydroxyacetone kinase, phosphotransfer subunit.
 
 0.988
SEA64398.1
Dihydroxyacetone kinase, phosphotransfer subunit.
 
 0.988
SEA28466.1
Dihydroxyacetone kinase, N-terminal domain.
 
 
 0.981
SEA19417.1
Dihydroxyacetone kinase DhaK subunit.
 
 
 0.956
SEA64442.1
Dihydroxyacetone kinase DhaK subunit.
 
 
 0.956
SEA28494.1
Hypothetical protein.
 
     0.808
SEA64418.1
Dihydroxyacetone kinase DhaL subunit.
  
  
 
0.802
SEA19389.1
Dihydroxyacetone kinase DhaL subunit.
  
  
 
0.798
SEA81135.1
Glycerol 2-dehydrogenase (NAD+).
  
 
 0.751
SEA38589.1
Glycerol dehydrogenase.
  
 
 0.640
Your Current Organism:
Eubacterium aggregans
NCBI taxonomy Id: 81409
Other names: DSM 12183, E. aggregans, Eubacterium aggregans Mechichi et al. 2000, strain SR12
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