Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SEA35959.1Colicin import membrane protein. (248 aa)    
Predicted Functional Partners:
SEA65907.1
Lysophospholipase L1.
  
 0.831
SEA35935.1
Chromosome partitioning protein.
  
    0.787
nadE
NAD+ synthase (glutamine-hydrolysing); Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
   
  0.749
SEA79973.1
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II.
   
 
 0.573
SEA35903.1
Carboxysome shell and ethanolamine utilization microcompartment protein CcmL/EutN.
       0.501
SEA35202.1
Prepilin-type N-terminal cleavage/methylation domain-containing protein.
  
 
 0.467
SEA08077.1
D-glucuronyl C5-epimerase C-terminus.
   
  0.444
SEA15914.1
Hypothetical protein.
    
 0.435
SEA01106.1
Protein of unknown function.
  
 
 0.407
Your Current Organism:
Eubacterium aggregans
NCBI taxonomy Id: 81409
Other names: DSM 12183, E. aggregans, Eubacterium aggregans Mechichi et al. 2000, strain SR12
Server load: medium (54%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.