STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEA41261.1Hypothetical protein. (101 aa)    
Predicted Functional Partners:
SEA41239.1
Transcriptional regulatory protein LevR, contains PRD, AAA+ and EIIA domains.
 
   
 0.975
SEA41196.1
PTS system IIB component, Gat family.
 
 
 0.952
SEA79755.1
RNA polymerase, sigma 54 subunit, RpoN/SigL.
  
 
 0.941
SEA41174.1
PTS system IIC component, Gat family.
 
 
 0.933
SEA41217.1
PTS system IIA component, Gat family.
 
   
 0.929
SEA28746.1
PTS system D-fructose-specific IIA component (F1P-forming), Frc family /PTS system D-fructose-specific IIB component (F1P-forming), Frc family /PTS system D-fructose-specific IIC component (F1P-forming), Frc family.
  
 
 0.925
SEA59512.1
PTS system, N-acetylgalactosamine-specific IIA component.
 
 
 0.917
SDZ90128.1
PTS system, fructose-specific IIC component.
  
 
 0.906
SEA46272.1
PTS system, galactitol-specific IIB component.
 
 
 0.847
SEA46254.1
PTS system, galactitol-specific IIC component.
 
 
 0.845
Your Current Organism:
Eubacterium aggregans
NCBI taxonomy Id: 81409
Other names: DSM 12183, E. aggregans, Eubacterium aggregans Mechichi et al. 2000, strain SR12
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.