Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
xylB-3Xylulokinase. (501 aa)    
Predicted Functional Partners:
tal
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily.
  
 
 0.761
SDZ93638.1
Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
    
 0.597
SEA38777.1
Glycerol-3-phosphate dehydrogenase (NAD(P)+); Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
  
  
 0.549
SEA78478.1
L-ribulose 5-phosphate 4-epimerase.
 
 
 0.545
SEA38266.1
L-fucose isomerase.
 
 
 0.492
araB
L-ribulokinase.
 
 
0.467
SEA46370.1
L-fuculose-phosphate aldolase.
  
 
 0.463
SEA74322.1
Ribulose-5-phosphate 3-epimerase.
    
 0.461
SDZ91603.1
Fructokinase; Belongs to the carbohydrate kinase PfkB family.
 
 
 0.448
SEA38807.1
Deoxyribonucleoside regulator.
 
    0.443
Your Current Organism:
Eubacterium aggregans
NCBI taxonomy Id: 81409
Other names: DSM 12183, E. aggregans, Eubacterium aggregans Mechichi et al. 2000, strain SR12
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