Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SEA39873.1Protein of unknown function. (181 aa)    
Predicted Functional Partners:
SEA39830.1
Dihydropyrimidine dehydrogenase (NAD+) subunit PreA.
 
     0.729
SEA39857.1
Dihydropyrimidine dehydrogenase (NAD+) subunit PreT.
 
     0.686
SEA39805.1
Dihydropyrimidinase.
 
     0.661
SEA62535.1
Hypothetical protein.
  
     0.639
SEA50691.1
Hypothetical protein.
  
     0.615
SEA39568.1
3-aminobutyryl-CoA ammonia-lyase.
 
     0.556
SEA39534.1
3-aminobutyryl-CoA ammonia-lyase.
 
     0.527
SEA39754.1
N-carbamoyl-L-amino-acid hydrolase.
 
     0.524
SEA46159.1
Looped-hinge helix DNA binding domain-containing protein, AbrB family.
  
     0.409
Your Current Organism:
Eubacterium aggregans
NCBI taxonomy Id: 81409
Other names: DSM 12183, E. aggregans, Eubacterium aggregans Mechichi et al. 2000, strain SR12
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.