Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
SEA46892.1Xylulokinase; Belongs to the FGGY kinase family. (512 aa)    
Predicted Functional Partners:
SEA46849.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
 
  
  0.794
SEA46868.1
Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily.
       0.746
SEA78478.1
L-ribulose 5-phosphate 4-epimerase.
 
 
 0.524
SEA38266.1
L-fucose isomerase.
 
 
 0.523
SEA46829.1
GntR family transcriptional regulator.
       0.492
SDZ91603.1
Fructokinase; Belongs to the carbohydrate kinase PfkB family.
 
 
 0.491
araB
L-ribulokinase.
 
 
0.479
SEA46370.1
L-fuculose-phosphate aldolase.
  
 
 0.463
SDZ93638.1
Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
    
 0.461
SEA74322.1
Ribulose-5-phosphate 3-epimerase.
    
 0.461
Your Current Organism:
Eubacterium aggregans
NCBI taxonomy Id: 81409
Other names: DSM 12183, E. aggregans, Eubacterium aggregans Mechichi et al. 2000, strain SR12
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