Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SEA50488.1Chorismate mutase; Belongs to the UPF0735 family. (144 aa)    
Predicted Functional Partners:
SEA50440.1
Threonine synthase.
 
  
 0.908
thrB
Homoserine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily.
 
  
  0.901
SEA72747.1
Chorismate mutase.
  
 
 0.824
SEA50409.1
Homoserine dehydrogenase.
 
  
  0.774
SEA54827.1
Prephenate dehydrogenase.
     
 0.755
SEA25416.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
     
  0.752
SEA50662.1
5-methyltetrahydrofolate--homocysteine methyltransferase.
     
  0.750
aroK
Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.
     
 0.741
SDZ92346.1
Anthranilate synthase component 2.
     
  0.738
SDZ92371.1
Anthranilate synthase, component I.
     
  0.738
Your Current Organism:
Eubacterium aggregans
NCBI taxonomy Id: 81409
Other names: DSM 12183, E. aggregans, Eubacterium aggregans Mechichi et al. 2000, strain SR12
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