Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
SEA50901.1Pimeloyl-ACP methyl ester carboxylesterase. (269 aa)    
Predicted Functional Partners:
SEA79973.1
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II.
 
 0.984
SEA78615.1
Cupin domain protein.
  
 
 0.813
SEA79099.1
IMP dehydrogenase.
    
 0.777
guaA
GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP.
   
  0.774
SEA25416.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
 
 0.767
cinA
Competence/damage-inducible protein cinA; Belongs to the CinA family.
    
  0.758
SEA72747.1
Chorismate mutase.
     
 0.747
proC
Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.
    
  0.623
SEA56055.1
Acyl-CoA dehydrogenase.
  
 0.554
SDZ90436.1
Hypothetical protein.
   
 0.525
Your Current Organism:
Eubacterium aggregans
NCBI taxonomy Id: 81409
Other names: DSM 12183, E. aggregans, Eubacterium aggregans Mechichi et al. 2000, strain SR12
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