STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEA54680.1Protein of unknown function. (176 aa)    
Predicted Functional Partners:
SEA54656.1
Hypothetical protein.
 
     0.956
metAA
Homoserine O-succinyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine; Belongs to the MetA family.
       0.705
SEA54725.1
Cysteine synthase A; Belongs to the cysteine synthase/cystathionine beta- synthase family.
       0.520
SEA35614.1
Dehydratase medium subunit.
  
     0.419
SEA64360.1
Major membrane immunogen, membrane-anchored lipoprotein.
  
    0.419
SEA14161.1
Threonine kinase.
 
     0.413
Your Current Organism:
Eubacterium aggregans
NCBI taxonomy Id: 81409
Other names: DSM 12183, E. aggregans, Eubacterium aggregans Mechichi et al. 2000, strain SR12
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.