Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
SEA56237.1NitT/TauT family transport system permease protein. (260 aa)    
Predicted Functional Partners:
SEA56218.1
NitT/TauT family transport system ATP-binding protein.
 
 0.997
SEA56261.1
NitT/TauT family transport system substrate-binding protein.
 
 0.995
SEA26154.1
NitT/TauT family transport system ATP-binding protein.
 
 0.947
SEA26238.1
NitT/TauT family transport system substrate-binding protein.
  
 0.918
SEA56285.1
Carbon-monoxide dehydrogenase catalytic subunit.
 
    0.809
SEA84935.1
Hypothetical protein.
    
 0.443
SEA77763.1
Rubredoxin.
  
 
  0.442
SEA47856.1
Formate dehydrogenase major subunit.
 
  
 0.439
SEA79849.1
Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family.
    
  0.439
SEA25113.1
NADH-FMN oxidoreductase RutF, flavin reductase (DIM6/NTAB) family.
  
 
  0.411
Your Current Organism:
Eubacterium aggregans
NCBI taxonomy Id: 81409
Other names: DSM 12183, E. aggregans, Eubacterium aggregans Mechichi et al. 2000, strain SR12
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