Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
SEA58448.1Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB. (383 aa)    
Predicted Functional Partners:
SEA58428.1
CoA-substrate-specific enzyme activase, putative.
 0.997
SEA58497.1
Selenium metabolism protein YedF; Belongs to the sulfur carrier protein TusA family.
 
    0.924
SEA08854.1
CoA-substrate-specific enzyme activase, putative.
  
 0.901
SEA34067.1
Aldehyde dehydrogenase, molybdenum-binding subunit apoprotein.
 
  
  0.817
SDZ89202.1
Selenium-dependent xanthine dehydrogenase.
    
  0.788
SEA02633.1
Propionate CoA-transferase; Belongs to the 3-oxoacid CoA-transferase family.
    
 0.752
SEA25328.1
Acetate CoA/acetoacetate CoA-transferase beta subunit.
    
  0.744
SEA25348.1
Acetate CoA/acetoacetate CoA-transferase alpha subunit.
    
  0.735
SEA58516.1
Cysteine desulfurase family protein.
 
     0.718
SEA13620.1
TusA-related sulfurtransferase; Belongs to the sulfur carrier protein TusA family.
 
    0.702
Your Current Organism:
Eubacterium aggregans
NCBI taxonomy Id: 81409
Other names: DSM 12183, E. aggregans, Eubacterium aggregans Mechichi et al. 2000, strain SR12
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