Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
SEA59863.1ArsR family transcriptional regulator. (98 aa)    
Predicted Functional Partners:
SEA59889.1
Predicted TIM-barrel enzyme.
  
  
 0.649
SEA59670.1
Arsenate reductase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
 
  
 0.618
SEA59694.1
ADP-ribose pyrophosphatase; Belongs to the Nudix hydrolase family.
    
  0.577
SEA59792.1
Glycine cleavage system H protein.
       0.556
SEA59820.1
NAD-dependent dihydropyrimidine dehydrogenase, PreA subunit.
     
 0.547
SEA59641.1
Arsenite efflux ATP-binding protein ArsA.
 
   
 0.546
SEA59587.1
Transcriptional regulator, ArsR family.
 
  
 0.543
SEA13914.1
Cd2+/Zn2+-exporting ATPase.
  
  
 0.534
SEA84922.1
Cd2+/Zn2+-exporting ATPase.
  
  
 0.534
SEA59731.1
DGC domain-containing protein.
       0.531
Your Current Organism:
Eubacterium aggregans
NCBI taxonomy Id: 81409
Other names: DSM 12183, E. aggregans, Eubacterium aggregans Mechichi et al. 2000, strain SR12
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