Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
SEA58540.1Xanthine dehydrogenase accessory factor. (270 aa)    
Predicted Functional Partners:
SEA58595.1
Probable selenium-dependent hydroxylase accessory protein YqeC.
 
  
 0.957
SEA58516.1
Cysteine desulfurase family protein.
     0.863
SEA58562.1
Molybdenum cofactor cytidylyltransferase.
 
  
  0.859
SEA51760.1
Nitrogen fixation protein NifU.
  
 
 0.837
SEA84318.1
NifU homolog involved in Fe-S cluster formation.
  
 
 0.837
SEA58497.1
Selenium metabolism protein YedF; Belongs to the sulfur carrier protein TusA family.
 
 
 
 0.824
SEA47658.1
Adenylyltransferase and sulfurtransferase.
  
 
 0.811
SEA47054.1
Xanthine dehydrogenase accessory factor.
   
 0.781
SEA58617.1
Predicted transcriptional regulator YheO, contains PAS and DNA-binding HTH domains.
  
    0.778
SEA56976.1
Hypothetical protein.
  
 
 0.770
Your Current Organism:
Eubacterium aggregans
NCBI taxonomy Id: 81409
Other names: DSM 12183, E. aggregans, Eubacterium aggregans Mechichi et al. 2000, strain SR12
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