Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SEA61151.1DNA-binding transcriptional regulator, MurR/RpiR family, contains HTH and SIS domains. (281 aa)    
Predicted Functional Partners:
SEA83275.1
PTS system IIA component, Glc family /PTS system IIB component, Glc family /PTS system IIC component, Glc family.
 
 
 0.883
SDZ89356.1
PTS system IIA component, Glc family.
  
 
 0.868
SEA25416.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
 
  0.773
SDZ91658.1
PTS system, sucrose-specific IIC component.
  
 
 0.550
SDZ89462.1
PTS system maltose-specific IIB component, Glc family /PTS system maltose-specific IIC component, Glc family.
  
 
 0.550
SEA61129.1
L-iditol 2-dehydrogenase.
    
  0.545
deoC-3
Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily.
    
  0.436
SEA61092.1
Ribulokinase; Belongs to the FGGY kinase family.
       0.432
Your Current Organism:
Eubacterium aggregans
NCBI taxonomy Id: 81409
Other names: DSM 12183, E. aggregans, Eubacterium aggregans Mechichi et al. 2000, strain SR12
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.