Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
SEA61515.1Carboxysome shell and ethanolamine utilization microcompartment protein CcmL/EutN. (179 aa)    
Predicted Functional Partners:
SEA61568.1
Ethanolamine utilization protein EutN.
 
 
 
 0.954
SEA61546.1
Na+-translocating ferredoxin:NAD+ oxidoreductase RNF, RnfC subunit.
 
    0.946
SEA61612.1
Ethanolamine utilization protein EutJ.
 
     0.921
SEA61666.1
Ethanolamine utilization cobalamin adenosyltransferase.
 
  
 0.908
SEA61465.1
Ethanolamine utilization protein EutQ.
 
  
 0.893
SEA61488.1
Ethanolamine transporter.
 
   
 0.825
SEA35766.1
Ethanolamine utilisation protein EutN/carboxysome.
 
 
 
 0.817
SEA35850.1
Na+-translocating ferredoxin:NAD+ oxidoreductase RNF, RnfC subunit.
 
    0.765
SEA61588.1
Hypothetical protein.
       0.759
SEA61758.1
Ethanolamine utilization protein EutL.
 
  
 0.749
Your Current Organism:
Eubacterium aggregans
NCBI taxonomy Id: 81409
Other names: DSM 12183, E. aggregans, Eubacterium aggregans Mechichi et al. 2000, strain SR12
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