Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Gene Fusion
Co-occurrence
Co-expression
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[Homology]
Score
SEA60838.1Methanogenic corrinoid protein MtbC1. (210 aa)    
Predicted Functional Partners:
SEA60818.1
5-methyltetrahydrofolate--homocysteine methyltransferase.
    0.978
SEA30213.1
5-methyltetrahydrofolate--homocysteine methyltransferase.
 
    0.974
SEA31744.1
5-methyltetrahydrofolate--homocysteine methyltransferase.
 
    0.888
SEA20576.1
5-methyltetrahydrofolate--homocysteine methyltransferase.
 
    0.886
SEA60865.1
Xylulokinase.
       0.737
SDZ99062.1
Methyltetrahydrofolate--corrinoid iron-sulfur protein Co-methyltransferase.
 
    0.720
SEA60892.1
Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family.
 
 
  0.701
SEA20158.1
Trimethylamine---corrinoid protein Co-methyltransferase.
  
 
  0.670
SDZ98809.1
5-methyltetrahydrofolate--homocysteine methyltransferase.
 
    0.644
SEA76697.1
Trimethylamine:corrinoid methyltransferase.
  
 
  0.622
Your Current Organism:
Eubacterium aggregans
NCBI taxonomy Id: 81409
Other names: DSM 12183, E. aggregans, Eubacterium aggregans Mechichi et al. 2000, strain SR12
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