Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SEA63468.12-hydroxy-3-oxopropionate reductase. (297 aa)    
Predicted Functional Partners:
SEA63484.1
Uncharacterized conserved protein YgbK, DUF1537 family.
  
 0.912
SEA78251.1
Putative nucleotide-binding of sugar-metabolising enzyme.
  
 0.797
SEA72643.1
Putative nucleotide-binding of sugar-metabolising enzyme.
  
 0.787
SEA38167.1
Uncharacterized conserved protein YgbK, DUF1537 family.
  
 0.775
SEA25416.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
    
  0.773
SEA50873.1
Glycerate kinase; Belongs to the glycerate kinase type-1 family.
  
 
 0.623
SEA38241.1
2-dehydro-3-deoxyglucarate aldolase; Belongs to the HpcH/HpaI aldolase family.
 
 
 0.579
SEA79973.1
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II.
    
 0.494
SEA63448.1
Subtilase family protein; Belongs to the peptidase S8 family.
       0.477
SEA76381.1
Enamidase.
    
  0.467
Your Current Organism:
Eubacterium aggregans
NCBI taxonomy Id: 81409
Other names: DSM 12183, E. aggregans, Eubacterium aggregans Mechichi et al. 2000, strain SR12
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