Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SEA69526.1Amino acid ABC transporter ATP-binding protein, PAAT family. (252 aa)    
Predicted Functional Partners:
SEA69549.1
Amino acid ABC transporter membrane protein, PAAT family.
 0.996
SEA51991.1
Amino acid ABC transporter membrane protein, PAAT family.
 0.993
SEA52015.1
Polar amino acid transport system substrate-binding protein.
 
 0.990
SEA54874.1
Amino acid ABC transporter membrane protein, PAAT family.
 0.969
SEA69575.1
Amino acid ABC transporter substrate-binding protein, PAAT family.
 
 0.951
SEA54851.1
Amino acid ABC transporter substrate-binding protein, PAAT family; Belongs to the bacterial solute-binding protein 3 family.
 
 0.897
SEA30407.1
Amino acid ABC transporter substrate-binding protein, PAAT family; Belongs to the bacterial solute-binding protein 3 family.
 
 0.890
SEA78648.1
ATP-binding cassette, subfamily B.
 
     
0.842
SEA78521.1
ATP-binding cassette, subfamily B.
 
     
0.839
SDZ97660.1
Putative ABC transport system permease protein.
 
      0.827
Your Current Organism:
Eubacterium aggregans
NCBI taxonomy Id: 81409
Other names: DSM 12183, E. aggregans, Eubacterium aggregans Mechichi et al. 2000, strain SR12
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