Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
SEA76361.1Amino acid synthesis. (193 aa)    
Predicted Functional Partners:
SEA76381.1
Enamidase.
 
     0.932
SEA76551.1
Hypothetical protein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein.
 
     0.874
SEA76571.1
NAD-dependent dihydropyrimidine dehydrogenase, PreA subunit.
 
     0.871
SEA76338.1
methylmalonyl-CoA mutase C-terminal domain-containing protein.
 
     0.852
SEA76309.1
Methylitaconate delta2-delta3-isomerase.
 
     0.700
SEA76287.1
Conserved hypothetical protein.
 
     0.698
SEA76269.1
Carboxyvinyl-carboxyphosphonate phosphorylmutase.
 
     0.666
SEA76422.1
Molybdopterin-binding domain of aldehyde dehydrogenase.
 
     0.593
SEA76446.1
Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain.
 
     0.534
SEA76247.1
L-serine dehydratase.
       0.509
Your Current Organism:
Eubacterium aggregans
NCBI taxonomy Id: 81409
Other names: DSM 12183, E. aggregans, Eubacterium aggregans Mechichi et al. 2000, strain SR12
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