Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SEA82538.1Regulatory protein, luxR family. (470 aa)    
Predicted Functional Partners:
SEA13188.1
Signal transduction histidine kinase.
  
 0.938
SDZ91379.1
PAS domain S-box-containing protein.
  
 0.936
SEA12246.1
Signal transduction histidine kinase.
  
 0.936
SEA40183.1
Hypothetical protein.
  
 0.936
SEA56360.1
PAS domain S-box-containing protein.
  
 0.936
SEA61044.1
PAS domain S-box-containing protein.
  
 0.936
SEA82846.1
Signal transduction histidine kinase.
  
 0.936
SEA87106.1
Cache domain-containing protein.
 
 
 0.899
SEA40412.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
  
 0.890
SEA82639.1
Double zinc ribbon.
 
     0.842
Your Current Organism:
Eubacterium aggregans
NCBI taxonomy Id: 81409
Other names: DSM 12183, E. aggregans, Eubacterium aggregans Mechichi et al. 2000, strain SR12
Server load: medium (56%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.