Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
SEA84655.14Fe-4S single cluster domain of Ferredoxin I. (243 aa)    
Predicted Functional Partners:
SEA84639.1
Predicted permease.
 
     0.958
SEA25416.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
    
 0.911
SEA84672.1
4Fe-4S binding domain-containing protein.
 
     0.843
SEA84624.1
cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases.
 
     0.829
SEA54535.1
NADPH-dependent glutamate synthase beta chain.
     
 0.787
SEA84252.1
Mannose-6-phosphate isomerase, cupin superfamily.
 
     0.753
SEA84722.1
Hypothetical protein.
 
     0.750
SEA84219.1
cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases.
 
     0.700
SEA58884.1
Putative selenate reductase.
     
 0.536
SEA26371.1
NAD(P)-dependent iron-only hydrogenase diaphorase component flavoprotein.
    
 0.493
Your Current Organism:
Eubacterium aggregans
NCBI taxonomy Id: 81409
Other names: DSM 12183, E. aggregans, Eubacterium aggregans Mechichi et al. 2000, strain SR12
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