Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
Experiments
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[Homology]
Score
SEA85079.1Nitrogen regulatory protein PII. (221 aa)    
Predicted Functional Partners:
SEA85064.1
Protein of unknown function.
 
     0.947
SEA65730.1
Ammonium transporter.
  
 0.894
SEA81421.1
Nitrogen regulatory protein PII; Belongs to the P(II) protein family.
  
 0.894
SEA66072.1
UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase; Belongs to the MurCDEF family. MurE subfamily.
   
 
 0.743
argB
N-acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily.
    
 
 0.732
SEA79259.1
Glutamine synthetase.
  
 
 0.501
SEA47611.1
ADP-ribosylglycohydrolase.
    
 
 0.456
nadE
NAD+ synthase (glutamine-hydrolysing); Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
     
 0.454
SEA26238.1
NitT/TauT family transport system substrate-binding protein.
    
 
 0.443
SEA56261.1
NitT/TauT family transport system substrate-binding protein.
    
 
 0.443
Your Current Organism:
Eubacterium aggregans
NCBI taxonomy Id: 81409
Other names: DSM 12183, E. aggregans, Eubacterium aggregans Mechichi et al. 2000, strain SR12
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