STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102292943Keratin 97; Belongs to the intermediate filament family. (502 aa)    
Predicted Functional Partners:
UNC79
Unc-79 homolog, NALCN channel complex subunit.
    
 0.862
ranbp2
RAN binding protein 2.
   
 0.688
rbbp5
Retinoblastoma binding protein 5.
    
 0.668
ash2l
Ash2 like, histone lysine methyltransferase complex subunit.
    
 0.664
LOC102309789
Keratin 4; Belongs to the intermediate filament family.
  
0.635
LOC102292851
Keratin 8; Belongs to the intermediate filament family.
  
0.634
nup107
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
    
 0.629
ak9
Adenylate kinase 9.
    
  0.629
nup133
Nucleoporin 133.
    
 0.624
LOC102310094
Zgc:158846; Belongs to the intermediate filament family.
  
0.618
Your Current Organism:
Haplochromis burtoni
NCBI taxonomy Id: 8153
Other names: Astatotilapia burtoni, Chromis burtoni, H. burtoni
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.