STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102311727ANK_REP_REGION domain-containing protein. (396 aa)    
Predicted Functional Partners:
ift81
Intraflagellar transport 81 homolog.
    
 0.661
rps3
Ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
    
 0.660
ift22
Intraflagellar transport 22 homolog (Chlamydomonas).
    
 0.630
ift88
Intraflagellar transport 88 homolog.
   
 0.623
ift52
Intraflagellar transport 52 homolog (Chlamydomonas).
    
 0.614
ubxn7
UBX domain-containing protein 7.
    
 0.613
LOC102298840
Fleer.
    
 0.605
ENSHBUP00000020037
ANK_REP_REGION domain-containing protein.
  
 
 0.604
mars1
Methionyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 0.598
chdh
Choline dehydrogenase.
    
 0.597
Your Current Organism:
Haplochromis burtoni
NCBI taxonomy Id: 8153
Other names: Astatotilapia burtoni, Chromis burtoni, H. burtoni
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.