STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102314498HTH psq-type domain-containing protein. (607 aa)    
Predicted Functional Partners:
LOC102290675
Uncharacterized protein.
    
 
 0.457
ctbp1
C-terminal binding protein 1; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
    
 
 0.457
LOC102308982
C-terminal binding protein 1; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
    
 
 0.457
LOC102311721
Uncharacterized protein.
    
 
 0.457
ezh2
Enhancer of zeste 2 polycomb repressive complex 2 subunit.
   
 
 0.456
EZH1
Enhancer of zeste 1 polycomb repressive complex 2 subunit.
   
 
 0.456
LOC102304551
VEFS-Box domain-containing protein.
    
 
 0.432
suz12
SUZ12 polycomb repressive complex 2 subunit b.
    
 
 0.432
phgdh
D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
    
 
 0.406
LOC102303012
Nuclear receptor binding SET domain protein 1b.
  
 
 0.400
Your Current Organism:
Haplochromis burtoni
NCBI taxonomy Id: 8153
Other names: Astatotilapia burtoni, Chromis burtoni, H. burtoni
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