STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102307278Uncharacterized protein. (439 aa)    
Predicted Functional Partners:
leo1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.944
ak9
Adenylate kinase 9.
   
 0.842
ENSHBUP00000005892
TROVE domain-containing protein.
   
 0.811
nudt12
Nudix (nucleoside diphosphate linked moiety X)-type motif 12.
   
  0.798
bbs9
Bardet-Biedl syndrome 9.
    
 0.793
bbs7
Bardet-Biedl syndrome 7.
    
 0.776
ttc8
Tetratricopeptide repeat domain 8.
    
 0.770
has2
Hyaluronan synthase 2.
  
 0.745
has3
Hyaluronan synthase 3.
  
 0.745
has1
Hyaluronan synthase 1.
  
 0.745
Your Current Organism:
Haplochromis burtoni
NCBI taxonomy Id: 8153
Other names: Astatotilapia burtoni, Chromis burtoni, H. burtoni
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.