STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102312259Olfactory receptor class A related 4. (315 aa)    
Predicted Functional Partners:
ENSHBUP00000002862
Uncharacterized protein.
    
 0.884
tac1
Tachykinin 1.
    
 0.811
sdhaf3
Succinate dehydrogenase complex assembly factor 3.
    
 0.811
LOC102303922
Vomeronasal type-1 receptor.
      
0.583
LOC102308071
Guanine nucleotide binding protein (G protein), beta polypeptide 1b.
    
  0.530
GNB5
Guanine nucleotide binding protein (G protein), beta 5b.
    
  0.530
LOC102294432
Guanine nucleotide binding protein (G protein), beta polypeptide 2.
    
  0.530
LOC102310109
Guanine nucleotide binding protein (G protein), beta 5a.
    
  0.530
gnb3
Guanine nucleotide binding protein (G protein), beta polypeptide 3a.
    
  0.530
gnb4
Guanine nucleotide binding protein (G protein), beta polypeptide 4b.
    
  0.530
Your Current Organism:
Haplochromis burtoni
NCBI taxonomy Id: 8153
Other names: Astatotilapia burtoni, Chromis burtoni, H. burtoni
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.