STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102310375Cyclin dependent kinase 18; Belongs to the protein kinase superfamily. (443 aa)    
Predicted Functional Partners:
cdc6
Cell division cycle 6 homolog (S. cerevisiae).
   
 0.908
CDC25B
Cell division cycle 25B.
   
 0.893
orc2
Origin recognition complex, subunit 2.
 
 
 0.886
ccna1
Cyclin A1; Belongs to the cyclin family.
   
 0.869
ccna2
Cyclin A2; Belongs to the cyclin family.
   
 0.869
mcm3
DNA helicase; Belongs to the MCM family.
   
 0.862
cdc23
CDC23 (cell division cycle 23, yeast, homolog).
    
 0.861
cdc27
Cell division cycle 27.
    
 0.860
cdc16
Cell division cycle 16 homolog (S. cerevisiae).
   
 0.854
atr
ATR serine/threonine kinase; Belongs to the PI3/PI4-kinase family.
    
 0.852
Your Current Organism:
Haplochromis burtoni
NCBI taxonomy Id: 8153
Other names: Astatotilapia burtoni, Chromis burtoni, H. burtoni
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.