Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSHBUP00000001650Rab-GAP TBC domain-containing protein. (366 aa)    
Predicted Functional Partners:
rab2a
RAB2A, member RAS oncogene family.
    
 0.890
LOC102293273
Uncharacterized protein.
    
 0.868
LOC102302896
Uncharacterized protein.
    
 0.868
prkaa1
Non-specific serine/threonine protein kinase.
    
 0.825
prkaa2
Non-specific serine/threonine protein kinase.
    
 0.825
rab25
RAB11a, member RAS oncogene family, like.
    
 0.777
ENSHBUP00000008385
RAB11B, member RAS oncogene family, a.
    
 0.777
LOC102308060
Uncharacterized protein.
    
 0.777
LOC102300580
RAB11a, member RAS oncogene family.
    
 0.777
LOC102310619
Uncharacterized protein.
    
 0.777
Your Current Organism:
Haplochromis burtoni
NCBI taxonomy Id: 8153
Other names: Astatotilapia burtoni, Chromis burtoni, H. burtoni
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