Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSHBUP00000001661Ig-like domain-containing protein. (217 aa)    
Predicted Functional Partners:
LOC102305448
Uncharacterized protein.
     
  0.870
LOC102300578
Sodium channel, voltage-gated, type IV, beta b.
     
  0.865
LOC102300588
Si:ch211-225p5.8.
     
  0.865
scn4b
Sodium channel, voltage-gated, type IV, beta a.
     
  0.865
LOC102291505
Ig-like domain-containing protein.
     
  0.865
scn1b
Ig-like domain-containing protein.
     
  0.865
ENSHBUP00000013077
Ig-like domain-containing protein.
    
  0.747
ENSHBUP00000013083
Ig-like domain-containing protein.
    
  0.747
ENSHBUP00000016585
IGv domain-containing protein.
    
  0.747
ENSHBUP00000020982
Ig-like domain-containing protein.
    
  0.747
Your Current Organism:
Haplochromis burtoni
NCBI taxonomy Id: 8153
Other names: Astatotilapia burtoni, Chromis burtoni, H. burtoni
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