Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
hddc3HD domain containing 3. (179 aa)    
Predicted Functional Partners:
rps18
Ribosomal protein S18; Belongs to the universal ribosomal protein uS13 family.
  
  0.916
nme9
NME/NM23 family member 8; Belongs to the NDK family.
   
 0.906
guk1
Guanylate kinase 1a.
  
 
 0.892
prune1
Prune exopolyphosphatase.
     
 0.892
LOC102288570
Guanylate kinase 1b.
  
 
 0.892
LOC102306270
Nucleoside diphosphate kinase.
    
 0.891
nme3
Nucleoside diphosphate kinase.
    
 0.891
LOC102308410
Nucleoside diphosphate kinase.
    
 0.891
nme6
Nucleoside diphosphate kinase.
    
 0.891
nme7
Nucleoside diphosphate kinase 7; Belongs to the NDK family.
    
 0.891
Your Current Organism:
Haplochromis burtoni
NCBI taxonomy Id: 8153
Other names: Astatotilapia burtoni, Chromis burtoni, H. burtoni
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