Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
cuedc1CUE domain containing 1b. (397 aa)    
Predicted Functional Partners:
arrdc3
Arrestin domain containing 3a.
    
   0.844
TOM1L2
Target of myb1 like 2 membrane trafficking protein; Belongs to the TOM1 family.
    
   0.781
ENSHBUP00000018582
Uncharacterized protein.
    
   0.781
LOC102307771
Target of myb1 like 2 membrane trafficking protein; Belongs to the TOM1 family.
    
   0.781
ENSHBUP00000029943
VHS domain-containing protein.
    
   0.781
tom1
Target of myb1 membrane trafficking protein.
    
   0.781
fam189b
Si:dkey-7f3.9.
    
   0.759
LOC102298766
E3 ubiquitin-protein ligase.
    
   0.757
LOC102289297
E3 ubiquitin-protein ligase.
    
   0.757
LOC102312723
Arrestin domain containing 1a.
    
   0.738
Your Current Organism:
Haplochromis burtoni
NCBI taxonomy Id: 8153
Other names: Astatotilapia burtoni, Chromis burtoni, H. burtoni
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