STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pds5aPDS5 cohesin associated factor A. (1294 aa)    
Predicted Functional Partners:
smc3
Structural maintenance of chromosomes protein.
   
 0.989
LOC102304191
Structural maintenance of chromosomes protein.
   
 0.977
smc1a
Structural maintenance of chromosomes protein.
   
 0.977
LOC102313370
WAPL cohesin release factor b.
   
 0.970
wapl
WAPL cohesin release factor a.
   
 0.967
LOC102310266
RAD21 cohesin complex component like 1.
   
 0.964
LOC102289767
RAD21 cohesin complex component a.
   
 0.964
RAD21
RAD21 cohesin complex component.
   
 0.964
rec8
REC8 meiotic recombination protein b.
   
 0.955
esco2
Establishment of sister chromatid cohesion N-acetyltransferase 2.
   
 0.937
Your Current Organism:
Haplochromis burtoni
NCBI taxonomy Id: 8153
Other names: Astatotilapia burtoni, Chromis burtoni, H. burtoni
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.