STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102294996BCL2 family apoptosis regulator BOK b. (213 aa)    
Predicted Functional Partners:
ENSHBUP00000024870
Uncharacterized protein.
    
 0.851
becn1
Beclin 1, autophagy related.
    
 0.850
bad
BCL2 associated agonist of cell death b.
   
 0.837
apaf1
Apoptotic peptidase activating factor 1.
    
 0.784
prkn
E3 ubiquitin-protein ligase parkin; Functions within a multiprotein E3 ubiquitin ligase complex, catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins; Belongs to the RBR family. Parkin subfamily.
    
 0.712
ENSHBUP00000015023
Cystatin domain-containing protein; Belongs to the cystatin family.
    
 0.706
tpx2
TPX2 microtubule nucleation factor.
    
 0.706
LOC102310476
Cystatin 14b, tandem duplicate 1.
    
 0.706
csta
Cystatin 14b, tandem duplicate 1; Belongs to the cystatin family.
    
 0.706
csta-2
Cystatin 14b, tandem duplicate 1; Belongs to the cystatin family.
    
 0.706
Your Current Organism:
Haplochromis burtoni
NCBI taxonomy Id: 8153
Other names: Astatotilapia burtoni, Chromis burtoni, H. burtoni
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.