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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102301031Zinc finger protein 281b. (828 aa)    
Predicted Functional Partners:
ENSHBUP00000006420
Uncharacterized protein.
   
  0.599
ak9
Adenylate kinase 9.
    
  0.597
nme9
NME/NM23 family member 8; Belongs to the NDK family.
    
 0.592
bard1
BRCA1 associated RING domain 1.
    
  0.560
ripk4
Receptor-interacting serine-threonine kinase 4.
    
 0.533
lamtor2
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 2.
    
  0.529
mrps11
Mitochondrial ribosomal protein S11; Belongs to the universal ribosomal protein uS11 family.
   
  0.529
mrps10
Mitochondrial ribosomal protein S10.
   
  0.529
chchd1
Coiled-coil-helix-coiled-coil-helix domain containing 1.
   
  0.527
sgk3
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
    
  0.527
Your Current Organism:
Haplochromis burtoni
NCBI taxonomy Id: 8153
Other names: Astatotilapia burtoni, Chromis burtoni, H. burtoni
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