STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gga2Uncharacterized protein. (611 aa)    
Predicted Functional Partners:
LOC102307660
RAB guanine nucleotide exchange factor (GEF) 1, like.
    
 0.994
LOC102292115
Uncharacterized protein.
    
 0.994
rabgef1
RAB guanine nucleotide exchange factor (GEF) 1.
    
 0.994
rabep1
Rabaptin, RAB GTPase binding effector protein 1.
    
 0.939
LOC102313858
Sortilin-related receptor, L(DLR class) A repeats containing.
    
 
 0.924
LOC102294444
Golgi associated, gamma adaptin ear containing, ARF binding protein 3a.
  
0.908
gga3
Golgi associated, gamma adaptin ear containing, ARF binding protein 3b.
  
0.906
igf2r
Insulin-like growth factor 2 receptor.
    
 
 0.894
bace1
Beta-secretase 1; Belongs to the peptidase A1 family.
    
 0.875
LOC102304010
Uncharacterized protein.
  
  
 
0.835
Your Current Organism:
Haplochromis burtoni
NCBI taxonomy Id: 8153
Other names: Astatotilapia burtoni, Chromis burtoni, H. burtoni
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.