STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSHBUP00000005153Uncharacterized protein. (100 aa)    
Predicted Functional Partners:
acot7
Acyl-CoA thioesterase 7.
   
 
 0.856
dnal4
Dynein light chain.
    
 0.834
dnali1
Dynein, axonemal, light intermediate chain 1.
   
 
 0.781
sod1
Superoxide dismutase [Cu-Zn]; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family.
     
 0.778
sod3
Superoxide dismutase [Cu-Zn]; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family.
     
 0.778
ENSHBUP00000006420
Uncharacterized protein.
    
  0.733
ENSHBUP00000019240
Uncharacterized protein.
    
 0.726
dnai2
Dynein, axonemal, intermediate chain 2b.
    
 0.726
ntng1
Netrin g1a.
    
 0.720
LOC102308381
Vav 3 guanine nucleotide exchange factor b.
    
 0.720
Your Current Organism:
Haplochromis burtoni
NCBI taxonomy Id: 8153
Other names: Astatotilapia burtoni, Chromis burtoni, H. burtoni
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