STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HOMER1Homer scaffold protein 1. (356 aa)    
Predicted Functional Partners:
LOC102311926
Glutamate receptor, metabotropic 1a.
    
  0.880
LOC102299451
WH1 domain-containing protein.
  
 
 
0.847
LOC102302338
Glutamate receptor, metabotropic 1b.
    
  0.846
homer3
Homer scaffold protein 3b.
  
 
 
0.846
LOC102299270
Glutamate receptor, metabotropic 5a.
    
  0.839
grm5
Glutamate receptor, metabotropic 5b.
    
  0.839
LOC102304452
Homer scaffold protein 1b.
  
 
 
0.675
LOC102293176
Glutamate receptor, metabotropic 2b.
    
  0.556
LOC102306442
G_PROTEIN_RECEP_F3_4 domain-containing protein.
    
  0.556
grm3
Glutamate receptor, metabotropic 3.
    
  0.556
Your Current Organism:
Haplochromis burtoni
NCBI taxonomy Id: 8153
Other names: Astatotilapia burtoni, Chromis burtoni, H. burtoni
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.