LOC102304392 protein (Haplochromis burtoni) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

LOC102304392

Mannosidase, endo-alpha. (440 aa)

Predicted Functional Partners:

ak9

0.932

nme9

0.877

gmps

0.770

ephx2

0.761

ak3

0.730

LOC102310470

0.730

ak4

0.730

LOC102298430

0.730

ENSHBUP00000031082

0.730

LOC102302700

0.709

Your Current Organism:

Haplochromis burtoni

NCBI taxonomy Id: 8153
Other names: Astatotilapia burtoni, Chromis burtoni, H. burtoni

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSHBUP00000031082	LOC102298430	ENSHBUP00000031082	ENSHBUP00000027006	Uncharacterized protein; Belongs to the adenylate kinase family.	Uncharacterized protein.	0.856
ENSHBUP00000031082	LOC102304392	ENSHBUP00000031082	ENSHBUP00000006063	Uncharacterized protein; Belongs to the adenylate kinase family.	Mannosidase, endo-alpha.	0.730
ENSHBUP00000031082	LOC102310470	ENSHBUP00000031082	ENSHBUP00000010313	Uncharacterized protein; Belongs to the adenylate kinase family.	Adenylate kinase 7a.	0.856
ENSHBUP00000031082	ak3	ENSHBUP00000031082	ENSHBUP00000000238	Uncharacterized protein; Belongs to the adenylate kinase family.	GTP:AMP phosphotransferase AK3, mitochondrial; Involved in maintaining the homeostasis of cellular nucleotides by catalyzing the interconversion of nucleoside phosphates. Has GTP:AMP phosphotransferase and ITP:AMP phosphotransferase activities.	0.893
ENSHBUP00000031082	ak4	ENSHBUP00000031082	ENSHBUP00000020820	Uncharacterized protein; Belongs to the adenylate kinase family.	GTP:AMP phosphotransferase AK3, mitochondrial; Involved in maintaining the homeostasis of cellular nucleotides by catalyzing the interconversion of nucleoside phosphates. Has GTP:AMP phosphotransferase and ITP:AMP phosphotransferase activities.	0.899
ENSHBUP00000031082	ak9	ENSHBUP00000031082	ENSHBUP00000026887	Uncharacterized protein; Belongs to the adenylate kinase family.	Adenylate kinase 9.	0.921
ENSHBUP00000031082	ephx2	ENSHBUP00000031082	ENSHBUP00000032878	Uncharacterized protein; Belongs to the adenylate kinase family.	Epoxide hydrolase 2, cytoplasmic.	0.871
ENSHBUP00000031082	gmps	ENSHBUP00000031082	ENSHBUP00000024636	Uncharacterized protein; Belongs to the adenylate kinase family.	Guanine monophosphate synthase.	0.658
ENSHBUP00000031082	nme9	ENSHBUP00000031082	ENSHBUP00000022639	Uncharacterized protein; Belongs to the adenylate kinase family.	NME/NM23 family member 8; Belongs to the NDK family.	0.907
LOC102298430	ENSHBUP00000031082	ENSHBUP00000027006	ENSHBUP00000031082	Uncharacterized protein.	Uncharacterized protein; Belongs to the adenylate kinase family.	0.856
LOC102298430	LOC102304392	ENSHBUP00000027006	ENSHBUP00000006063	Uncharacterized protein.	Mannosidase, endo-alpha.	0.730
LOC102298430	LOC102310470	ENSHBUP00000027006	ENSHBUP00000010313	Uncharacterized protein.	Adenylate kinase 7a.	0.818
LOC102298430	ak3	ENSHBUP00000027006	ENSHBUP00000000238	Uncharacterized protein.	GTP:AMP phosphotransferase AK3, mitochondrial; Involved in maintaining the homeostasis of cellular nucleotides by catalyzing the interconversion of nucleoside phosphates. Has GTP:AMP phosphotransferase and ITP:AMP phosphotransferase activities.	0.885
LOC102298430	ak4	ENSHBUP00000027006	ENSHBUP00000020820	Uncharacterized protein.	GTP:AMP phosphotransferase AK3, mitochondrial; Involved in maintaining the homeostasis of cellular nucleotides by catalyzing the interconversion of nucleoside phosphates. Has GTP:AMP phosphotransferase and ITP:AMP phosphotransferase activities.	0.868
LOC102298430	ak9	ENSHBUP00000027006	ENSHBUP00000026887	Uncharacterized protein.	Adenylate kinase 9.	0.901
LOC102298430	ephx2	ENSHBUP00000027006	ENSHBUP00000032878	Uncharacterized protein.	Epoxide hydrolase 2, cytoplasmic.	0.871
LOC102298430	gmps	ENSHBUP00000027006	ENSHBUP00000024636	Uncharacterized protein.	Guanine monophosphate synthase.	0.658
LOC102298430	nme9	ENSHBUP00000027006	ENSHBUP00000022639	Uncharacterized protein.	NME/NM23 family member 8; Belongs to the NDK family.	0.907
LOC102302700	LOC102304392	ENSHBUP00000024288	ENSHBUP00000006063	Glutamate receptor, ionotropic, N-methyl D-aspartate 1a.	Mannosidase, endo-alpha.	0.709
LOC102304392	ENSHBUP00000031082	ENSHBUP00000006063	ENSHBUP00000031082	Mannosidase, endo-alpha.	Uncharacterized protein; Belongs to the adenylate kinase family.	0.730