STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cd2bp2CD2 (cytoplasmic tail) binding protein 2. (374 aa)    
Predicted Functional Partners:
txnl4a
Thioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family.
    
 0.973
ddx23
DEAD (Asp-Glu-Ala-Asp) box polypeptide 23.
   
 
 0.961
prpf6
PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae).
   
 
 0.956
prpf8
Pre-mRNA processing factor 8.
    
 
 0.955
eftud2
Elongation factor Tu GTP binding domain containing 2.
    
 
 0.947
txnl4b
Thioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family.
    
 0.940
ENSHBUP00000033230
Reverse transcriptase domain-containing protein.
   
 
 0.936
ENSHBUP00000009808
SEC63 domain-containing protein.
   
 
 0.935
snrnp200
Small nuclear ribonucleoprotein 200 (U5).
   
 
 0.935
aar2
AAR2 splicing factor.
   
 
 0.929
Your Current Organism:
Haplochromis burtoni
NCBI taxonomy Id: 8153
Other names: Astatotilapia burtoni, Chromis burtoni, H. burtoni
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